Taking place after the original series, Special A: Jougai Rantou returns to the pearly gates of prestigious private high school Hakusenkan, where the Special A, a class of the seven highest-ranking students, resides.

Hikari Hanazono competes with Kei Takishima to help the most people, Megumi Yamamoto hopes to close her distance between Yahiro Saiga, Finn Koupe Shuzette finally gets a chance to visit Ryuu Tsuji's house, and Tadashi Karino searches for a gift to give Akira Toudou. Meanwhile, a rumor circulates stating that a certain type of chocolate can grant its eater any wish. With all these antics in Special A, every day is full of laughter and fun for its members and their friends!